Gilead Sciences Inc. (a company registered in the US State of Delaware) v Nucana Plc

JurisdictionEngland & Wales
CourtChancery Division (Patents Court)
JudgeMr Justice Meade
Judgment Date21 March 2023
Neutral Citation[2023] EWHC 611 (Pat)
Year2023
Docket NumberCase No: HP-2021-000007
Between:
(1) Gilead Sciences Inc. (a company registered in the US State of Delaware)
(2) Gilead Sciences Limited
Claimants/Part 20 Defendants
and
Nucana Plc
Defendant/Part 20 Claimant
Before:

The Hon. Mr. Justice Meade

Case No: HP-2021-000007

IN THE HIGH COURT OF JUSTICE

BUSINESS AND PROPERTY COURTS OF ENGLAND AND WALES

INTELLECTUAL PROPERTY LIST (ChD)

PATENTS COURT

The Rolls Building

7 Rolls Buildings

Fetter Lane

London EC4A 1NL

Michael Tappin KC, Tom Moody-Stuart KC and James Whyte (instructed by Bird & Bird LLP) for the Claimants/Part 20 Defendants

Piers Acland KC, Tom Mitcheson KC and Andrew Lomas (instructed by Powell Gilbert LLP) for the Defendant/Part 20 Claimant

Hearing dates: 20 and 23–27 January and 1–3 February 2023

APPROVED JUDGMENT

Remote hand-down: This judgment will be handed down remotely by circulation to the parties or their representatives by email and release to The National Archives. A copy of the judgment in final form as handed down should be available on The National Archives website shortly thereafter but can otherwise be obtained on request by email to the Judicial Office (press.enquiries@judiciary.uk).

Mr Justice Meade

Introduction

5

EPO timing

8

Relevance of Idenix v Gilead

9

The witnesses

10

Professor Micklefield – Gilead's medicinal chemistry expert

10

Doctor Galmarini – Gilead's oncology expert

10

Prof Matthias Götte

11

Professor Seley-Radtke – NuCana's medicinal chemistry expert (non-synthesis)

11

Professor Smyth – NuCana's oncology expert

12

Professor Davies – NuCana's synthetic chemistry expert

12

Prof Davies' instructions for the EPO

14

The skilled team

16

CGK

17

Approach to CGK – the law

17

Agreed CGK

18

Nucleotides and nucleosides

18

Nucleoside analogues

19

Gemcitabine

19

Mechanisms of action

20

Metabolic pathways

21

Overcoming resistance/intracellular drug delivery issues with nucleoside analogues

21

Measuring activity

22

Disputed CGK – issues other than synthetic chemistry

23

Mechanisms of action and metabolism of NAs in cancer

23

AraU

23

dFdUMP

24

Positional changes

25

2' position of the sugar, 5 position of the pyrimidine base

25

Q position of the sugar

28

Changing the base

28

(Bio)isosterism

29

Prof McGuigan's ProTide work

31

Potential utility as anti-cancer agents

32

Disputed CGK – synthetic chemistry

34

Literature search

34

Experience of nucleosides

35

Fluorination conditions

35

Analytical techniques

35

The Patents

35

Teaching of the specification

35

Quality of the experiments in the Patents

37

In vitro data

37

In vivo data

38

Assessment

38

Differences in EP365

39

Claims in issue

39

Claim Scope and infringement

41

Validity

41

Added matter

41

The central argument

42

The law

43

Domestic law about selection from lists

47

The EPO case law

47

T615/95

50

T50/97

51

T948/02 Great Lakes

51

T1150/15 Shionogi

51

G2/10

52

Relevance of motive

53

The preliminary opinion of the TBA on EP190

53

The facts

54

Relevant disclosure of the PCT

54

Relevant disclosure of EP190 as proposed to be amended

57

Comparison

58

Is there added matter?

58

Alkyl

59

Conclusion on EP190 added matter

60

UKIPO comments

60

EP365

60

Industrial applicability and plausibility

61

Law on capable of industrial application

61

Law on plausibility

63

Ab initio plausibility or implausibility

64

Technical contribution – NuCana's case

65

Disclosure of the contributions

67

Cytotoxicity – plausibility facts and assessment

68

Two aspects of Dr Galmarini's evidence

69

Assessment

71

Research tools

73

Lack of Industrial Application

74

“Sufficiency”/“existence in fact”

75

Assessment

77

Improved intracellular delivery – plausibility facts and assessment

79

Shepard

79

Undue burden insufficiency

80

Terminology

81

The Law

81

The standard for undue burden

82

The role of primary and secondary evidence

83

Overview of the routes

84

Two broad categories

84

Glyceraldehyde routes

85

Fluorination routes

85

Fluorination conditions

86

Fluorination Schemes Document

87

Choice of successful fluorination conditions used by Concept

88

Prioritisation

88

Primary evidence

89

Prof Micklefield

89

Prof Davies

91

Comparison

91

Secondary evidence: real teams

92

Idenix

92

Personnel

93

Competence of Dr Griffon

93

Focus on yield

94

Fluorination conditions

95

Failure of the glyceraldehyde work

95

Pharmasset

96

Mr Clark and Prof Pankiewicz

96

Overall timing

96

Glyceraldehyde routes

97

Fluorination route

97

Secondary evidence: CRO experiments

98

Concept

98

FOB

99

Analysis

99

Conclusions

102

INTRODUCTION

1

In this action the Claimants (together, “Gilead”) seek the revocation of two patents owned by the Defendant, NuCana. They are European Patent (UK) 2 955 190 B1 (“EP190”) and European Patent (UK) 3 904 365 B1 (“EP365”). I will refer to them together as “the Patents”. They are from the same family and although their specifications differ, the differences mostly do not matter and I pick up those points of significance as they arise below. Where I refer to specification paragraph numbers without expressly saying which of the Patents, then I mean EP190.

2

EP190 and EP365 also differ in their claims, with EP365 being narrower.

3

The Patents have the same unchallenged priority date of 21 July 2003. As I explain in more detail below, EP190 is under opposition in the EPO with a Technical Board of Appeal (“TBA”) hearing due on 24 March this year. EP365 was only granted on 7 September 2022.

4

NuCana counterclaims for infringement by Gilead's commercially very successful drug compound sofosbuvir, which is the active ingredient, or one of the active ingredients in its Sovaldi, Harvoni, Vosevi and Epclusa products, which are anti-virals.

5

NuCana had its own product covered by the claims of the Patents, Acelarin, intended as a cancer drug. It has run into difficulties with clinical trials. That is not of any direct relevance to the issues before me although Gilead sought to emphasise that the Patents teach that the compounds disclosed are cytotoxic, which is desirable in a cancer drug but, Gilead submits, positively to be avoided in an anti-viral.

6

There is no real challenge to infringement if the claims of the Patents are valid and Gilead took the role of claimant at the trial.

7

The Patents arise from the work of the late Prof Chris McGuigan of Cardiff University. It will help an understanding of this judgment if I explain at this early stage and at a very high level the technology involved.

8

For decades it has been known that cancer can be treated with drugs based on nucleoside analogues (also referred to as “NAs”, I will use the full term and the abbreviation interchangeably in this judgment and both are used extensively in the papers in the case). These are compounds which are similar to natural nucleosides but which are modified so that, by one or more mechanisms, they interfere with cells' normal replication and kill them or stop them from growing. This process affects healthy as well as cancerous cells but cancer cells replicate much faster so are hit harder.

9

A common general knowledge (“CGK”) nucleoside analogue drug which had been successfully used in treating cancer was gemcitabine:

10

A problem with nucleoside analogues arose with getting them into cells. The reasons for this are relatively complex and are discussed in more detail below. At this introductory level what is significant is that Prof McGuigan's work was concerned with making prodrugs, referred to as ProTides, to try to overcome this problem. The ProTide approach involves phosphoramidate modifications (again, explained below) to nucleoside analogues.

11

The claims of the Patents are product claims; they are defined by a Markush formula (the permitted substituents vary from claim to claim) and cover ProTide nucleoside analogues as just described in which the nucleoside moiety is gemcitabine or gemcitabine-like. Sofosbuvir falls within the Markush group:

12

In prosecution and in the opposition proceedings NuCana has successively narrowed its patent claims. At this trial it seeks to amend EP190 in two proposed amended forms (one unconditional and one conditional, the latter being a small extra limitation over the former), and EP365 has claims that are narrower still. NuCana floated a further set of amendments to EP190 in late December 2022, shortly before trial, but abandoned it on the first day of trial.

13

Gilead attacks the Patents on the following grounds:

i) Added matter: Gilead says that the Markush group definitions of the claims of the Patents are not clearly and unambiguously disclosed in the relevant original application.

ii) Lack of plausibility: Gilead says that the Patents do not plausibly disclose any technical contribution common to substantially all the claimed compounds. NuCana says that there is a plausible technical contribution in relation to the compounds having cytotoxic activity or improved intracellular delivery; it says that the cytotoxicity means that the compounds have the potential to be used in the treatment of cancer. Lack of plausibility is run under the legal heads of:

a) Obviousness over US 2003/0109697 (“Shepard”) on the basis that given the lack of plausibility there is no technical contribution;

b) Insufficiency.

iii) Lack of industrial applicability. This is very...

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